Package: LFApp 1.4.1

LFApp: Shiny Apps for Lateral Flow Assays

Shiny apps for the quantitative analysis of images from lateral flow assays (LFAs). The images are segmented and background corrected and color intensities are extracted. The apps can be used to import and export intensity data and to calibrate LFAs by means of linear, loess, or gam models. The calibration models can further be saved and applied to intensity data from new images for determining concentrations.

Authors:Filip Paskali [aut, cre], Weronika Schary [aut], Matthias Kohl [aut]

LFApp_1.4.1.tar.gz
LFApp_1.4.1.zip(r-4.5)LFApp_1.4.1.zip(r-4.4)LFApp_1.4.1.zip(r-4.3)
LFApp_1.4.1.tgz(r-4.4-any)LFApp_1.4.1.tgz(r-4.3-any)
LFApp_1.4.1.tar.gz(r-4.5-noble)LFApp_1.4.1.tar.gz(r-4.4-noble)
LFApp_1.4.1.tgz(r-4.4-emscripten)LFApp_1.4.1.tgz(r-4.3-emscripten)
LFApp.pdf |LFApp.html
LFApp/json (API)
NEWS

# Install 'LFApp' in R:
install.packages('LFApp', repos = c('https://fpaskali.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/fpaskali/lfapp/issues

On CRAN:

calibrationimage-processingmedical-image-processingshiny

10 exports 3 stars 1.33 score 80 dependencies 2 scripts 277 downloads

Last updated 4 months agofrom:bf6d8749c3. Checks:ERROR: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesFAILAug 25 2024
R-4.5-winWARNINGAug 25 2024
R-4.5-linuxWARNINGAug 25 2024
R-4.4-winWARNINGAug 25 2024
R-4.4-macWARNINGAug 25 2024
R-4.3-winWARNINGAug 25 2024
R-4.3-macWARNINGAug 25 2024

Exports:run_analysisrun_calrun_corerun_mobile_analysisrun_mobile_calrun_mobile_corerun_mobile_quanrun_quanthreshold_litriangle

Dependencies:abindbase64encBiocGenericsbitopsbslibcachemcaToolsclicolorspacecommonmarkcrayoncrosstalkdigestDTEBImageevaluatefansifarverfastmapfftwtoolsfontawesomefsggplot2gluegplotsgtablegtoolshighrhtmltoolshtmlwidgetshttpuvisobandjpegjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevallifecyclelocfitmagrittrMASSMatrixmemoisemgcvmimemunsellnlmepillarpkgconfigpngpromisesR6rappdirsRColorBrewerRcppRCurlrlangrmarkdownsassscalesshinyshinyFilesshinyjsshinyMobileshinythemessourcetoolstibbletifftinytexutf8vctrsviridisLitewithrxfunxtableyaml

LFA App User's Guide

Rendered fromLFApp.Rmdusingknitr::rmarkdownon Aug 25 2024.

Last update: 2021-07-26
Started: 2021-03-17

Readme and manuals

Help Manual

Help pageTopics
Shiny Apps for Lateral Flow Assays.LFApp-package LFApp
Run Analysis Shiny Appsrun_analysis run_cal run_core run_mobile_analysis run_mobile_cal run_mobile_core run_mobile_quan run_quan
Li Thresholding Algorithmthreshold_li
Triangle Thresholding Algorithmtriangle